VTK
vtkNewickTreeReader.h
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1/*=========================================================================
2
3 Program: Visualization Toolkit
4 Module: vtkNewickTreeReader.h
5
6 Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
7 All rights reserved.
8 See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
9
10 This software is distributed WITHOUT ANY WARRANTY; without even
11 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
12 PURPOSE. See the above copyright notice for more information.
13
14=========================================================================*/
34#ifndef vtkNewickTreeReader_h
35#define vtkNewickTreeReader_h
36
37#include "vtkIOInfovisModule.h" // For export macro
38#include "vtkDataReader.h"
39
40class vtkDoubleArray;
42class vtkStringArray;
43class vtkTree;
44
45class VTKIOINFOVIS_EXPORT vtkNewickTreeReader : public vtkDataReader
46{
47public:
50 void PrintSelf(ostream& os, vtkIndent indent);
51
53
57 vtkTree *GetOutput(int idx);
58 void SetOutput(vtkTree *output);
59 int ReadNewickTree(const char * buffer, vtkTree & tree);
61
62protected:
65
68
69 // Since the Outputs[0] has the same UpdateExtent format
70 // as the generic DataObject we can copy the UpdateExtent
71 // as a default behavior.
74
76 void CountNodes(const char * buffer, vtkIdType *numNodes);
78 vtkDoubleArray *weights, vtkStringArray *names, vtkIdType parent);
79private:
80 vtkNewickTreeReader(const vtkNewickTreeReader&) VTK_DELETE_FUNCTION;
81 void operator=(const vtkNewickTreeReader&) VTK_DELETE_FUNCTION;
82};
83
84#endif
helper superclass for objects that read vtk data files
Definition: vtkDataReader.h:50
dynamic, self-adjusting array of double
a simple class to control print indentation
Definition: vtkIndent.h:40
Store zero or more vtkInformation instances.
Store vtkAlgorithm input/output information.
An editable directed graph.
read vtkTree from Newick formatted file
void SetOutput(vtkTree *output)
int ReadNewickTree(const char *buffer, vtkTree &tree)
vtkTree * GetOutput(int idx)
virtual int FillOutputPortInformation(int, vtkInformation *)
Fill the output port information objects for this algorithm.
vtkIdType BuildTree(char *buffer, vtkMutableDirectedGraph *g, vtkDoubleArray *weights, vtkStringArray *names, vtkIdType parent)
virtual int RequestData(vtkInformation *, vtkInformationVector **, vtkInformationVector *)
void CountNodes(const char *buffer, vtkIdType *numNodes)
vtkTree * GetOutput()
Get the output of this reader.
virtual int RequestUpdateExtent(vtkInformation *, vtkInformationVector **, vtkInformationVector *)
void PrintSelf(ostream &os, vtkIndent indent)
Methods invoked by print to print information about the object including superclasses.
static vtkNewickTreeReader * New()
a vtkAbstractArray subclass for strings
A rooted tree data structure.
Definition: vtkTree.h:61
int vtkIdType
Definition: vtkType.h:287